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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Anticodon table
[PPCM] marine sediment metagenome; marine sediment
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
2
Tyr
ATA
0
Cys
ACA
0
T
GAA
40
GGA
20
GTA
33
GCA
29
C
Leu
TAA
32
TGA
37
ochre
TTA
0
opal Sec
TCA
14
A
CAA
25
CGA
5
amber
CTA
0
Trp
CCA
28
G
C
Leu
AAG
3
Pro
AGG
4
His
ATG
0
Arg
ACG
31
T
GAG
29
GGG
12
GTG
30
GCG
1
C
TAG
28
TGG
31
Gln
TTG
31
TCG
9
A
CAG
13
CGG
4
CTG
12
CCG
11
G
A
Ile
AAT
0
Thr
AGT
4
Asn
ATT
0
Ser
ACT
0
T
GAT
30
GGT
28
GTT
32
GCT
30
C
TAT
1
TGT
31
Lys
TTT
37
Arg
TCT
29
A
Met
CAT
86
CGT
8
CTT
11
CCT
21
G
G
Val
AAC
0
Ala
AGC
1
Asp
ATC
0
Gly
ACC
0
T
GAC
12
GGC
13
GTC
46
GCC
40
C
TAC
52
TGC
28
Glu
TTC
46
TCC
29
A
CAC
3
CGC
3
CTC
10
CCC
8
G
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