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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Anticodon table
[FTKF] metagenome; soil
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
3
Tyr
ATA
0
Cys
ACA
0
T
GAA
3
GGA
2
GTA
2
GCA
4
C
Leu
TAA
2
TGA
2
ochre
TTA
0
opal Sec
TCA
1
A
CAA
5
CGA
1
amber
CTA
0
Trp
CCA
3
G
C
Leu
AAG
0
Pro
AGG
0
His
ATG
0
Arg
ACG
3
T
GAG
3
GGG
2
GTG
2
GCG
0
C
TAG
3
TGG
1
Gln
TTG
4
TCG
1
A
CAG
1
CGG
2
CTG
7
CCG
2
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
3
GGT
3
GTT
8
GCT
3
C
TAT
0
TGT
3
Lys
TTT
6
Arg
TCT
2
A
Met
CAT
18
CGT
2
CTT
5
CCT
3
G
G
Val
AAC
2
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
2
GGC
5
GTC
3
GCC
9
C
TAC
2
TGC
2
Glu
TTC
3
TCC
5
A
CAC
4
CGC
2
CTC
3
CCC
3
G
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