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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Anticodon table
[FTKM] metagenome; soil
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
2
Tyr
ATA
0
Cys
ACA
0
T
GAA
5
GGA
4
GTA
6
GCA
6
C
Leu
TAA
2
TGA
6
ochre
TTA
0
opal Sec
TCA
1
A
CAA
4
CGA
4
amber
CTA
0
Trp
CCA
3
G
C
Leu
AAG
0
Pro
AGG
0
His
ATG
0
Arg
ACG
7
T
GAG
6
GGG
4
GTG
8
GCG
0
C
TAG
6
TGG
4
Gln
TTG
8
TCG
0
A
CAG
10
CGG
4
CTG
2
CCG
4
G
A
Ile
AAT
0
Thr
AGT
1
Asn
ATT
0
Ser
ACT
0
T
GAT
7
GGT
3
GTT
6
GCT
6
C
TAT
0
TGT
5
Lys
TTT
5
Arg
TCT
4
A
Met
CAT
19
CGT
1
CTT
5
CCT
8
G
G
Val
AAC
1
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
4
GGC
4
GTC
10
GCC
4
C
TAC
5
TGC
6
Glu
TTC
4
TCC
7
A
CAC
4
CGC
4
CTC
1
CCC
8
G
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