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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Anticodon table
[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
15
Tyr
ATA
0
Cys
ACA
0
T
GAA
67
GGA
57
GTA
114
GCA
177
C
Leu
TAA
125
TGA
78
ochre
TTA
3
opal Sec
TCA
24
A
CAA
81
CGA
52
amber
CTA
3
Trp
CCA
98
G
C
Leu
AAG
27
Pro
AGG
15
His
ATG
0
Arg
ACG
72
T
GAG
53
GGG
66
GTG
95
GCG
34
C
TAG
92
TGG
114
Gln
TTG
98
TCG
56
A
CAG
52
CGG
43
CTG
56
CCG
54
G
A
Ile
AAT
15
Thr
AGT
28
Asn
ATT
0
Ser
ACT
1
T
GAT
89
GGT
65
GTT
191
GCT
88
C
TAT
26
TGT
188
Lys
TTT
143
Arg
TCT
153
A
Met
CAT
281
CGT
60
CTT
59
CCT
88
G
G
Val
AAC
15
Ala
AGC
1
Asp
ATC
0
Gly
ACC
4
T
GAC
32
GGC
67
GTC
240
GCC
101
C
TAC
81
TGC
195
Glu
TTC
130
TCC
177
A
CAC
51
CGC
34
CTC
61
CCC
49
G
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