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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Anticodon table
[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
11
Tyr
ATA
1
Cys
ACA
0
T
GAA
70
GGA
59
GTA
97
GCA
127
C
Leu
TAA
117
TGA
73
ochre
TTA
2
opal Sec
TCA
23
A
CAA
73
CGA
54
amber
CTA
1
Trp
CCA
98
G
C
Leu
AAG
15
Pro
AGG
3
His
ATG
0
Arg
ACG
62
T
GAG
43
GGG
45
GTG
76
GCG
17
C
TAG
70
TGG
99
Gln
TTG
68
TCG
42
A
CAG
51
CGG
53
CTG
59
CCG
44
G
A
Ile
AAT
15
Thr
AGT
16
Asn
ATT
1
Ser
ACT
0
T
GAT
60
GGT
57
GTT
130
GCT
75
C
TAT
24
TGT
126
Lys
TTT
107
Arg
TCT
127
A
Met
CAT
236
CGT
62
CTT
55
CCT
67
G
G
Val
AAC
15
Ala
AGC
1
Asp
ATC
0
Gly
ACC
2
T
GAC
41
GGC
49
GTC
146
GCC
83
C
TAC
83
TGC
110
Glu
TTC
100
TCC
109
A
CAC
55
CGC
50
CTC
62
CCC
46
G
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