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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[OBVQ] human gut metagenome; faeces
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
11
GGA
16
GTA
16
GCA
13
C
Leu
TAA
9
TGA
15
ochre
TTA
0
opal Sec
TCA
1
A
CAA
11
CGA
6
amber
CTA
0
Trp
CCA
16
G
C
Leu
AAG
2
Pro
AGG
0
His
ATG
0
Arg
ACG
11
T
GAG
9
GGG
7
GTG
12
GCG
0
C
TAG
12
TGG
11
Gln
TTG
10
TCG
2
A
CAG
12
CGG
8
CTG
11
CCG
8
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
15
GGT
9
GTT
21
GCT
10
C
TAT
1
TGT
18
Lys
TTT
19
Arg
TCT
13
A
Met
CAT
43
CGT
11
CTT
16
CCT
9
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
6
GGC
13
GTC
22
GCC
17
C
TAC
17
TGC
13
Glu
TTC
14
TCC
9
A
CAC
3
CGC
1
CTC
9
CCC
8
G
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