The detailed information of tRNA gene sequence


Sequence ID>W1710794406
Genome IDLJQD01000054
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas syringae pv. castaneae [LJQD]
Start position on genome 5620
End posion on genome 5696
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccacacaga
tRNA gene sequence 
CGCGGGATGGAGCAGNNTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAA
TCCGGCTCCCGCAACCA
Downstream region at tRNA end position 
aacgtcaaga
Secondary structure (Cloverleaf model)
>W1710794406	Met	CAT
                   a      ACCA aacgtcaaga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G G C C     A
      N G A        G      | + | | |     A
    N       C G A G       G T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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