The detailed information of tRNA gene sequence


Sequence ID>W1710853399
Genome IDLLWQ01000093
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParacoccus sp. MKU1 [LLWQ]
Start position on genome 3007
End posion on genome 2912
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gcgggactag
tRNA gene sequence 
GGAAGAGAAGCGTCCCCGGTGGGGCGGCCGGACTTCAAATCCGGTTGGGGCAGTGAGCCT
GTCCCGGGTGGGTTCGACTCCCACTCTCTTCCGCCA
Downstream region at tRNA end position 
gatgcgatga
Secondary structure (Cloverleaf model)
>W1710853399	SeC(p)	TCA
                   g      GCCA gatgcgatga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     C A C C C     A
      C C C        G      | | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          G     TTGGGGCAGTGAGCCTGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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