The detailed information of tRNA gene sequence


Sequence ID>W1710892322
Genome IDLNDP01000024
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium Ga0074141 [LNDP]
Start position on genome 888685
End posion on genome 888587
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
attttgattc
tRNA gene sequence 
GGAGGCGCATCCTGTCCGGTGATGGGCGCGGTCTTCAAAACCGTCAGCGGGTGCGCGAGA
GCGTACCTGGGTGGGTTCGACTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
gttttgaaag
Secondary structure (Cloverleaf model)
>W1710892322	SeC(p)	TCA
                   c      GCCA gttttgaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C   A          T C
                    A     C A C C C     A
      C C T        T      | | | | |     G
    G       G T C C       G T G G G     C
    G       + + | |                 T T
    T       T G G G
      G A          C     CAGCGGGTGCGCGAGAGCGTACCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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