The detailed information of tRNA gene sequence


Sequence ID>W1710910422
Genome IDLNRA01000007
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPhotobacterium leiognathi subsp. mandapamensis [LNRA]
Start position on genome 163333
End posion on genome 163239
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
acacaaatga
tRNA gene sequence 
GGAAGAACGGCGTATCCGGTGATGCGTCCGGATTTCAAATCCGGGTAGGGCTGCCAGCAG
TCCTGGGTAGGTTCGACTCCTATGTTCTTCCGCCA
Downstream region at tRNA end position 
cttcgtttgt
Secondary structure (Cloverleaf model)
>W1710910422	SeC(p)	TCA
                   a      GCCA cttcgtttgt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     A - T
                     C - G          T C
                    G     T A T C C     A
      C C T        G      + | | | |     G
    G       A T G C       G T A G G     C
    G       | + | |                 T T
    T       T G C G
      G A          T     GTAGGGCTGCCAGCAGTCCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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