The detailed information of tRNA gene sequence


Sequence ID>W1710944194
Genome IDLOQG01000001
Search identical group
Phylum/ClassFusobacteriota
SpeciesCaviibacter abscessus [LOQG]
Start position on genome 244500
End posion on genome 244409
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcccgccagt
tRNA gene sequence 
GGTGAAGTGTTAGAGTGGCCGAATATGCTCCCCTGCTAAGGGAGTGTCCAAGTAATATTG
GACCGAGGGTTCAAATCCCTCCTTCACCGCCA
Downstream region at tRNA end position 
ttttttttat
Secondary structure (Cloverleaf model)
>W1710944194	Ser	GCT
                   t      GCCA ttttttttat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G A T T       G A G G G     C
    G         | |                   T T
    C       A T A T
      C G A        G     TGTCCAAGTAATATTGGACC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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