The detailed information of tRNA gene sequence


Sequence ID>W131037620
Genome IDAMFF01000449
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPiscirickettsia salmonis LF-89 = ATCC VR-1361 [AMFF]
Start position on genome 14900
End posion on genome 14976
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gatattaata
tRNA gene sequence 
GCCCCGGTGGCACAGCTGGATAGCGCGATCCCCTCCTAAGGGATAGGTCACAGGTTCGAA
TCCTGTTCGGGGCACCA
Downstream region at tRNA end position 
actttataaa
Secondary structure (Cloverleaf model)
>W131037620	Arg	CCT
                   a      ACCA actttataaa
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G + T          T A
                    T     T G T C C     A
      C G A        G      | | | | |     G
    T       C A C G       A C A G G     C
    G       |   | |                 T T
    G       G C G C
      A T A        G     AGGTC
                    A - T
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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