The detailed information of tRNA gene sequence


Sequence ID>W1711065222
Genome IDLSBP01000018
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalomonadaceae bacterium T82-2 [LSBP]
Start position on genome 60173
End posion on genome 60260
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gacaatttgc
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTAAGTCGAAAGGCTTC
GAGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
cacagaatat
Secondary structure (Cloverleaf model)
>W1711065222	Ser	GGA
                   c      GCCA cacagaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TAAGTCGAAAGGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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