The detailed information of tRNA gene sequence


Sequence ID>W1711069113
Genome IDLSFI01000067
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesThermodesulfatator autotrophicus [LSFI]
Start position on genome 3441
End posion on genome 3536
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggccgccagt
tRNA gene sequence 
GGAAGCGCCAGGGGCCTGGTGGCCCCCCCGGGCTTCAAACCCGGTGCACCGTCGGAGACG
GCGGTGGGTGGGTTCGATTCCCATGCGCTTCCGCCA
Downstream region at tRNA end position 
tttttgttta
Secondary structure (Cloverleaf model)
>W1711069113	SeC	TCA
                   t      GCCA tttttgttta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T T
                    C     T A C C C     A
      T C C        A      + | | | |     G
    G       G G G G       G T G G G     C
    G       | | | |                 T T
    T       C C C C
      G G          C     TGCACCGTCGGAGACGGCGGTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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