The detailed information of tRNA gene sequence


Sequence ID>W1711074863
Genome IDLSJX01000231
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhizobiales bacterium CCH2-A4 [LSJX]
Start position on genome 4552
End posion on genome 4463
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcagcgcgcc
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGGGAAACCGTA
TCGCGGGTTCGAATCCCGCCCTGTCCGCCA
Downstream region at tRNA end position 
tttgcgcaaa
Secondary structure (Cloverleaf model)
>W1711074863	Ser	GGA
                   c      GCCA tttgcgcaaa
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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