The detailed information of tRNA gene sequence


Sequence ID>W131157221
Genome IDAQRQ01000017
Search identical group
Phylum/ClassUnclassified
SpeciesMicrogenomates bacterium SCGC AAA011-M05 OP11 bacterium SCGC AAA011-M05 [AQRQ]
Start position on genome 15956
End posion on genome 16044
Amino Acid Pseudo
Anticodon GCT
Upstream region at tRNA start position 
caatgtactt
tRNA gene sequence 
GGAGAGGTCGCATAGTTTGGTCAATTGCGGGAGTTTGCTAAATTCCTGAGTCGTAAGACT
CGCGTGAGTTCGAATCTCACCCTCTCCGCtc
Downstream region at tRNA end position 
aaggagaggt
Secondary structure (Cloverleaf model)
>W131157221	Pseudo	GCT
                   t      GCtc aaggagaggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
    T T G A        C      | | | | |     G
  T         T A C G       G T G A G     C
  G           | | |                 T T
  G         T T G C
    T C A A        G     TGAGTCGTAAGACTCGC
                    G - C
                    G - C
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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