The detailed information of tRNA gene sequence


Sequence ID>W131157224
Genome IDAQRQ01000017
Search identical group
Phylum/ClassUnclassified
SpeciesMicrogenomates bacterium SCGC AAA011-M05 OP11 bacterium SCGC AAA011-M05 [AQRQ]
Start position on genome 19229
End posion on genome 19316
Amino Acid Pseudo
Anticodon CGA
Upstream region at tRNA start position 
gggcgcataa
tRNA gene sequence 
GGAGGAGTGCAAGAGCGGTTTATTTGGCCGGTCTCGAAAACCGAGCGAGTCGCAAGACTC
ACAGAGGTTCGAATCCTCTCTCCTCCGCat
Downstream region at tRNA end position 
gagatttgaa
Secondary structure (Cloverleaf model)
>W131157224	Pseudo	CGA
                   a      GCat gagatttgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        G      | | | | |     G
    G       G A A C       A G A G G     C
    G       + | | |                 T T
    T       T T T G
      T T A        G     GCGAGTCGCAAGACTCAC
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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