The detailed information of tRNA gene sequence


Sequence ID>W131157229
Genome IDAQRR01000030
Search identical group
Phylum/ClassAtribacterota
SpeciesAtribacteria bacterium JGI 0000079-F20 OP9 bacterium JGI 0000079-F20 [AQRR]
Start position on genome 1343
End posion on genome 1436
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaaaaaatt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCAGTCGCCTGCTAAGCGATTAGGCGGGCTTAAACC
CGTCTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gcttgaatga
Secondary structure (Cloverleaf model)
>W131157229	Ser	GCT
                   t      GCCA gcttgaatga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TAGGCGGGCTTAAACCCGTCTC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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