The detailed information of tRNA gene sequence


Sequence ID>W131157246
Genome IDAQRU01000005
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Fervidibacteria bacterium JGI 0000054-H05 EM 19 bacterium JGI 0000054-H05 [AQRU]
Start position on genome 518
End posion on genome 612
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
attagaggac
tRNA gene sequence 
GGGAGCGGTTGAGGGCTGGTGCCCTCCCAGGACTTCAAATCCTGTGCACCGCCCAAAAGG
CGGTGGGTGGGTTCAATTCCCATCCGCTCCCGCCA
Downstream region at tRNA end position 
tattttgctt
Secondary structure (Cloverleaf model)
>W131157246	SeC(p)	TCA
                   c      GCCA tattttgctt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T T
                    T     T A C C C     A
      T C G        T      + | | | |     A
    G       G G A G       G T G G G     C
    G       | | | |                 T T
    T       C C T C
      G C          C     TGCACCGCCCAAAAGGCGGTGG
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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