The detailed information of tRNA gene sequence


Sequence ID>W131157280
Genome IDAQRW01000147
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Aerophobus profundus CD12 bacterium SCGC AAA252-L23 [AQRW]
Start position on genome 12489
End posion on genome 12565
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tttttcggtc
tRNA gene sequence 
GGGGCCGTAGTTCAGTTGGCTAGAATGCCAGACTGTCGATCTGGAGGTCGCGGGTTCGAG
CCCCGTCGGCCCCGCCA
Downstream region at tRNA end position 
aaaaacataa
Secondary structure (Cloverleaf model)
>W131157280	Asp	GTC
                   c      GCCA aaaaacataa
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      C T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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