The detailed information of tRNA gene sequence


Sequence ID>W131157409
Genome IDAQSD01000004
Search identical group
Phylum/ClassUnclassified
SpeciesMarinimicrobia bacterium SCGC AAA160-B08 [AQSD]
Start position on genome 22494
End posion on genome 22583
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
tttaatatca
tRNA gene sequence
GGAGGCGTGGCAGAGCGGTTGAATGCACTAGTCTTGAAAACTAGCAAGGGTGAAAGCCCT
TCAGAGGTTCGAATCCTCTCGCCTCCGCAA
Downstream region at tRNA end position
tgaataagcc
Secondary structure (Cloverleaf model)
>W131157409	Ser	TGA
                   a      GCAA tgaataagcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      | | | | |     G
    G       G A C G       A G A G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAAGGGTGAAAGCCCTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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