The detailed information of tRNA gene sequence


Sequence ID>W131157788
Genome IDAQST01000064
Search identical group
Phylum/ClassUnclassified
SpeciesCalescamantes bacterium SCGC AAA471-M6 EM 19 bacterium SCGC AAA471-M6 [AQST]
Start position on genome 16207
End posion on genome 16279
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtttttaagg
tRNA gene sequence 
GGCGACGTAGCTCAGAGGTAGAGCAGGGGTCTCATAAGCCCTGTGTCGTGGGTTCGAATC
CCACCGTCGCCACtt
Downstream region at tRNA end position 
ttttcatttg
Secondary structure (Cloverleaf model)
>W131157788	Met	CAT
                   g      ACtt ttttcatttg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
        G A        A      | | | | |     G
      A     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GTGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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