The detailed information of tRNA gene sequence


Sequence ID>W131157873
Genome IDAQTE01000109
Search identical group
Phylum/ClassUnclassified
SpeciesCalescamantes bacterium JGI 0000106-G12 EM 19 bacterium JGI 0000106-G12 [AQTE]
Start position on genome 4316
End posion on genome 4240
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atcagatatt
tRNA gene sequence 
GGCGACGTAGCCAAGCGGTCTAAGGCGGGGGATTGCAAATCCCTTATTCCCGGGTTCAAA
TCCCGGCGTCGCCTCCT
Downstream region at tRNA end position 
attataactg
Secondary structure (Cloverleaf model)
>W131157873	Cys	GCA
                   t      TCCT attataactg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    G       A C C G       C C G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TATTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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