The detailed information of tRNA gene sequence


Sequence ID>W131158330
Genome IDAQTY01000002
Search identical group
Phylum/ClassNitrospinota
SpeciesCandidatus Nitromaritima sp. SCGC AAA288-L16 SCGC AAA288-L16 [AQTY]
Start position on genome 62676
End posion on genome 62750
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
atacagttct
tRNA gene sequence 
CCCAACGTAGCTAAGGGGTAGAGCAACTGATTCGTAATCAGTAGGTCGACAGTTCAATTC
TGTCCGCTGGCTCCA
Downstream region at tRNA end position 
tataatacaa
Secondary structure (Cloverleaf model)
>W131158330	Thr	CGT
                   t      TCCA tataatacaa
                     C   C
                     C - G
                     C - G
                     A - T
                     A   C
                     C - G
                     G - C          T T
                    T     C T G T C     A
        G A        A      | | | | |     A
      G     A T C G       G A C A G     C
      G       | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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