The detailed information of tRNA gene sequence


Sequence ID>W131158363
Genome IDAQTZ01000025
Search identical group
Phylum/ClassChloroflexota
SpeciesSAR202 cluster bacterium SCGC AAA240-N13 [AQTZ]
Start position on genome 1562
End posion on genome 1638
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tgctgggcgt
tRNA gene sequence 
CGGGGTGTGGCCCAGTCCGGCAGGGCACCTGCATGGGGTGTAGGGGGTCGTCGGTTCGAA
TCCGACCACCCCGACCA
Downstream region at tRNA end position 
gaaaatgaaa
Secondary structure (Cloverleaf model)
>W131158363	Pro	GGG
                   t      ACCA gaaaatgaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A G C C     A
      T G A        G      | | | | |     G
    C       C C C G       G T C G G     C
    C       | | | |                 T T
    G       G G G C
      G C A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G + T
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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