The detailed information of tRNA gene sequence


Sequence ID>W131162398
Genome IDAQYS01000015
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Microgenomatus auricola OP11 bacterium SCGC AAA011-E14 [AQYS]
Start position on genome 57441
End posion on genome 57352
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cggaatactc
tRNA gene sequence 
GGAGAGGTCGCATAGTGGACTAGTGCAATGGTCTTGAAAACCATCGTGGCGGAAACGCTA
CCGTGGGTTCGAATCCCACCCTCTCCGCAA
Downstream region at tRNA end position 
aactttcttt
Secondary structure (Cloverleaf model)
>W131162398	Ser	TGA
                   c      GCAA aactttcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    A       G T G C
      C T A        A     CGTGGCGGAAACGCTACC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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