The detailed information of tRNA gene sequence


Sequence ID>W131162407
Genome IDAQYS01000016
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Microgenomatus auricola OP11 bacterium SCGC AAA011-E14 [AQYS]
Start position on genome 85795
End posion on genome 85870
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agcctttttt
tRNA gene sequence 
GCTGCGGTGGTGAAGTGGTTAACACAACTGTTTGCAAAACAGTCATGCAGGGGTTCGAAT
CCCCTTCGCAGCTCAA
Downstream region at tRNA end position 
taaaaaaggc
Secondary structure (Cloverleaf model)
>W131162407	Cys	GCA
                   t      TCAA taaaaaaggc
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     G - C
                     G + T          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       A G T G       A G G G G     C
    G         | | |                 T T
    T       A C A C
      T A          A     CATGC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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