The detailed information of tRNA gene sequence


Sequence ID>W131162410
Genome IDAQYT01000010
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria bacterium SCGC AAA011-A08 OD1 bacterium SCGC AAA011-A08 [AQYT]
Start position on genome 2329
End posion on genome 2405
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aattaatttc
tRNA gene sequence 
GGGCCCTTAGCTCATCTGGCTAGAGCGCCTCATTTGCAATGAGGAGGTGGCAGGTTCGAG
TCCTGTAGGGTCCACCT
Downstream region at tRNA end position 
gacgagtttt
Secondary structure (Cloverleaf model)
>W131162410	Ala	TGC
                   c      ACCT gacgagtttt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T G T C C     A
      C T A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTG
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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