The detailed information of tRNA gene sequence


Sequence ID>W131162413
Genome IDAQYT01000021
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria bacterium SCGC AAA011-A08 OD1 bacterium SCGC AAA011-A08 [AQYT]
Start position on genome 4135
End posion on genome 4219
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttatagactt
tRNA gene sequence 
GGAGGGTTGGCAGAATGGTAATGCACCGGTTTCGAAAACCGGCGGGCGCAAGCCCTTATA
GGTTCAAGTCCTATACCCTCCGCCA
Downstream region at tRNA end position 
gctcttctct
Secondary structure (Cloverleaf model)
>W131162413	Ser	CGA
                   t      GCCA gctcttctct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T G
                    T     T A T C C     A
        A A        G      | | | | |     A
      T     G A C G       A T A G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CGGGCGCAAGCCCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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