The detailed information of tRNA gene sequence


Sequence ID>W131162422
Genome IDAQYV01000011
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria bacterium SCGC AAA011-J21 OD1 bacterium SCGC AAA011-J21 [AQYV]
Start position on genome 4505
End posion on genome 4592
Amino Acid Ser
Anticodon ACT
Upstream region at tRNA start position 
gataaaatag
tRNA gene sequence 
GGAGAGTTGGCTGAGTGGTCGATAGCAACGGTTTACTAAACCGTAGTCCGAGCAATCGGA
CCGTGGGTTCGAATCCCTCACTCTCCGCgc
Downstream region at tRNA end position 
aaaattatat
Secondary structure (Cloverleaf model)
>W131162422	Ser	ACT
                   g      GCgc aaaattatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      |   | | |     G
    G       G T C G       G T G G G     C
    G       + | | |                 T T
    T       T A G C
      C G A        A     AGTCCGAGCAATCGGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    A C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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