The detailed information of tRNA gene sequence


Sequence ID>W131183010
Genome IDARRM01000003
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSalipiger mucosus DSM 16094 [ARRM]
Start position on genome 51949
End posion on genome 51875
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gccgcctacc
tRNA gene sequence 
GGGTGATTAGCTCAGTGGTAGAGCGCTTCGTTCACATCGAAGATGTCAGAAGTTCGAATC
TTCTATCACCCACCA
Downstream region at tRNA end position 
ttttcctctt
Secondary structure (Cloverleaf model)
>W131183010	Val	CAC
                   c      ACCA ttttcctctt
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     T C T T C     A
        G A        A      | | | | |     G
      T     C T C G       A G A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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