The detailed information of tRNA gene sequence


Sequence ID>W131192207
Genome IDASKT01000001
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria bacterium SCGC AAA036-E14 OD1 bacterium SCGC AAA036-E14 [ASKT]
Start position on genome 6778
End posion on genome 6866
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attgaagaag
tRNA gene sequence 
GGAGAGGTGGCTCGAGTGGTTGAAGGCGTCGCTTTCGAAAAGCGATGAAGTAGTAATACT
TCCGGGAGTTCGAATCTCCCTCTCTCCTCat
Downstream region at tRNA end position 
ttaaataatt
Secondary structure (Cloverleaf model)
>W131192207	Ser	CGA
                   g      TCat ttaaataatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C T C     A
    T G A G        G      | | | | |     G
  G         C T C G       G G G A G     C
  G           + | |                 T T
  T         A G G C
    T G A          G     TGAAGTAGTAATACTTCC
                    T - A
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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