The detailed information of tRNA gene sequence


Sequence ID>W131192220
Genome IDASKU01000010
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria bacterium SCGC AAA040-L21 OD1 bacterium SCGC AAA040-L21 [ASKU]
Start position on genome 9275
End posion on genome 9188
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
atcccaacac
tRNA gene sequence
GGAGGAGTGGCTGAGTGGTTTAAGGCGCACGCTTGGAAAGCGTGTGGGGAGCAATCCCTC
GCAGGTTCGAATCCTGTCTCCTCCGCAA
Downstream region at tRNA end position
aactagaaaa
Secondary structure (Cloverleaf model)
>W131192220	Ser	GGA
                   c      GCAA aactagaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TGGGGAGCAATCCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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