The detailed information of tRNA gene sequence


Sequence ID>W131192262
Genome IDASKW01000011
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria bacterium SCGC AAA010-E09 OD1 bacterium SCGC AAA010-E09 [ASKW]
Start position on genome 12295
End posion on genome 12221
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcaattattt
tRNA gene sequence 
GGCCCCATCGTCTAGTGGTTAGGACAGCGCGCTTTCAATGCGTAAACACGGGTTCGATTC
CCGTTGGGGCCACTA
Downstream region at tRNA end position 
agttttgaaa
Secondary structure (Cloverleaf model)
>W131192262	Glu	TTC
                   t      ACTA agttttgaaa
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T G C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAC
                    G + T
                    C - G
                    G - C
                    C - G
                    G + T
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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