The detailed information of tRNA gene sequence


Sequence ID>W131192282
Genome IDASKX01000003
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Paceibacter normanii OD1 bacterium SCGC AAA255-P19 [ASKX]
Start position on genome 55368
End posion on genome 55281
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgtccttcgg
tRNA gene sequence 
GGTGGGATGGCAGAGTGGACGATTGCACCGGTTTTGAAAACCGGAGTACTCGGAAGAGTA
CCGGGGGTTCGAATCCCTCTCCCACCGCtt
Downstream region at tRNA end position 
tttgccctcg
Secondary structure (Cloverleaf model)
>W131192282	Ser	TGA
                   g      GCtt tttgccctcg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        A     AGTACTCGGAAGAGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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