The detailed information of tRNA gene sequence


Sequence ID>W131192900
Genome IDASNF01000002
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Altimarinus pacificus GN02 bacterium JGI 0000068-E11 [ASNF]
Start position on genome 1637
End posion on genome 1561
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaaacatttt
tRNA gene sequence 
CGGGGTTTAGCTCAGTTGGCTAGAGTGTGCGCTTTGGGAGCGTGAGGCCACAGGTTCGAG
TCCTGTAACCCCGACCA
Downstream region at tRNA end position 
tttttgtttt
Secondary structure (Cloverleaf model)
>W131192900	Pro	TGG
                   t      ACCA tttttgtttt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A          T G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | +                 T T
    G       G A G T
      C T A        G     AGGCC
                    T + G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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