The detailed information of tRNA gene sequence


Sequence ID>W131192939
Genome IDASNH01000025
Search identical group
Phylum/Classcandidate division KSB1
Speciescandidate division KSB1 bacterium SCGC AAA255-C20 [ASNH]
Start position on genome 6854
End posion on genome 6939
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
aattttaaat
tRNA gene sequence
GGAGGATTAGTCCTAATTGGTAAGGCAGCGGTCTTGAAAACCGCCGGGCTCTGCCCTTGG
GGGTTCGAGTCCCTCATCCTCCGCCA
Downstream region at tRNA end position
ttttgttctt
Secondary structure (Cloverleaf model)
>W131192939	Ser	TGA
                   t      GCCA ttttgttctt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C C T G       G G G G G     C
    T         | + |                 T T
    G       A G G C
      G T A        A     CGGGCTCTGCCCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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