The detailed information of tRNA gene sequence


Sequence ID>W131193364
Genome IDASOC01000103
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Omnitrophus fodinae OP3 bacterium SCGC AAA011-A17 [ASOC]
Start position on genome 4336
End posion on genome 4260
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttaaccaatt
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGCACTGTGCTGATAACGCAGGGGTCAGTGGTTCGAA
TCCACTTGGGCCCACCA
Downstream region at tRNA end position 
tcattcatac
Secondary structure (Cloverleaf model)
>W131193364	Ile	GAT
                   t      ACCA tcattcatac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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