The detailed information of tRNA gene sequence


Sequence ID>W1711259837
Genome IDLYVO01000074
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. KK3 [LYVO]
Start position on genome 28240
End posion on genome 28148
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcggactgct
tRNA gene sequence 
GGAAACGTGACCGAGTGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGGGGTGTAGAGCC
TCATCGAGGGTTCGAATCCCTCCGTTTCCGCCA
Downstream region at tRNA end position 
agaacaacaa
Secondary structure (Cloverleaf model)
>W1711259837	Ser	GCT
                   t      GCCA agaacaacaa
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGGGGTGTAGAGCCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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