The detailed information of tRNA gene sequence


Sequence ID>W131217743
Genome IDATXC01000001
Search identical group
Phylum/ClassAquificota
SpeciesDesulfurobacterium sp. TC5-1 [ATXC]
Start position on genome 1066406
End posion on genome 1066500
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaacttttaa
tRNA gene sequence 
GGAGGCAGATGGAGGCTGGTGTCTCCCCCGGACTTCAAATCCGGTGGTCCCGCGAAGAGC
GGGACGGTAGGTTCGATTCCTATCTGCCTCCGCCA
Downstream region at tRNA end position 
tttctgcact
Secondary structure (Cloverleaf model)
>W131217743	SeC(p)	TCA
                   a      GCCA tttctgcact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T T
                    A     T A T C C     A
      T C G        T      + | | | |     G
    G       G A G G       G T A G G     C
    G       | | | |                 T T
    T       C T C C
      G T          C     TGGTCCCGCGAAGAGCGGGACG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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