The detailed information of tRNA gene sequence


Sequence ID>W131217993
Genome IDATXH01000006
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesThermodesulfatator atlanticus DSM 21156 [ATXH]
Start position on genome 94759
End posion on genome 94854
Amino Acid Pseudo
Anticodon GCA
Upstream region at tRNA start position 
gcaaattgga
tRNA gene sequence 
GGCCGGTATAAGGAGCTGGTGCTCCTCCAGGGCTGCAAACCCTGCGGGCCCCTGCTGAGA
GCAGGGGCTGGTTGGTTCGATTCCAACACCGGCCTCat
Downstream region at tRNA end position 
ttttattttg
Secondary structure (Cloverleaf model)
>W131217993	Pseudo	GCA
                   a      TCat ttttattttg
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A          T T
                    A     C A A C C     A
      C G A        T      | | | | |     G
    T       G G A A       G T T G G     C
    G       + |   |                 T T
    G       T C C T
      T G C        C     CGGGCCCCTGCTGAGAGCAGGGGCTG
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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