The detailed information of tRNA gene sequence


Sequence ID>W1711315121
Genome IDMAVP01000042
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfobacterales bacterium S7086C20 [MAVP]
Start position on genome 13590
End posion on genome 13493
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aattaacttc
tRNA gene sequence 
GGAAGTGGGTAGCTCGCTGGTGGGGCTCCCGGACTTCAAATCCGGTGTGGGGCGCTAGAA
CCGTCCCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
atttttgcct
Secondary structure (Cloverleaf model)
>W1711315121	SeC(p)	TCA
                   c      GCCA atttttgcct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    G     T A C C C     A
      C G C        T      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGTGGGGCGCTAGAACCGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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