The detailed information of tRNA gene sequence


Sequence ID>W1711319059
Genome IDMAYW01000059
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Scalindua rubra sp. BSI-1 [MAYW]
Start position on genome 9689
End posion on genome 9598
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggatatcata
tRNA gene sequence 
GGAGGGATGGCCGAGTGGACTAAGGCGGCAGTCTTGAAAACTGCAGTCCTGAGGAATCGG
GACCGTGGGTTCGAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
ttacaattga
Secondary structure (Cloverleaf model)
>W1711319059	Ser	TGA
                   a      GCCA ttacaattga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    A       A G G C
      C T A        G     AGTCCTGAGGAATCGGGACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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