The detailed information of tRNA gene sequence


Sequence ID>W131228864
Genome IDAUGI01000017
Search identical group
Phylum/ClassBacteroidota
SpeciesHugenholtzia roseola DSM 9546 [AUGI]
Start position on genome 31747
End posion on genome 31661
Amino Acid Pseudo
Anticodon GAG
Upstream region at tRNA start position 
accctttatc
tRNA gene sequence 
GCTCACGTGGTGAAATTGGTAGACACGCCATCTTGAGGGGGTGGTAAGCGCAAGCTTGTG
AGCGTTCGAGTCGCTCCGTGAGCACTA
Downstream region at tRNA end position 
ctattggttt
Secondary structure (Cloverleaf model)
>W131228864	Pseudo	GAG
                   c      ACTA ctattggttt
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     C - G
                     G - C          T G
                    T     C T C G C     A
      T A A        G      | | | | |     G
    T       A G T G       G A G C G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TAAGCGCAAGCTTGT
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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