The detailed information of tRNA gene sequence


Sequence ID>W131231884
Genome IDAUIU01000018
Search identical group
Phylum/ClassNitrospirota
SpeciesThermodesulfovibrio thiophilus DSM 17215 [AUIU]
Start position on genome 51841
End posion on genome 51915
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccatgggaaT
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCGTGGGTTCGAAT
CCCTTCACCTCCATat
Downstream region at tRNA end position 
ttaaaatcaa
Secondary structure (Cloverleaf model)
>W131231884	Ala	TGC
                   T      ATat ttaaaatcaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        A      +   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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