The detailed information of tRNA gene sequence


Sequence ID>W131231886
Genome IDAUIU01000018
Search identical group
Phylum/ClassNitrospirota
SpeciesThermodesulfovibrio thiophilus DSM 17215 [AUIU]
Start position on genome 64644
End posion on genome 64741
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
attctatatc
tRNA gene sequence 
GGGAGTGTAAGGGGTTCTGGTGTCCCCCCTGGACTTCAAATCCAGTGTTGCCTGTTCGAA
GCAGGCATGGTGGGTTCGATTCCCACACGCTCCCGCCA
Downstream region at tRNA end position 
aatttatcag
Secondary structure (Cloverleaf model)
>W131231886	SeC(p)	TCA
                   c      GCCA aatttatcag
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     T - A          T T
                    A     C A C C C     A
      C T T        A      | | | | |     G
    T       G G G G       G T G G G     C
    G       | | | |                 T T
    G       C C C C
      T G T        C     TGTTGCCTGTTCGAAGCAGGCATG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK