The detailed information of tRNA gene sequence


Sequence ID>W131231888
Genome IDAUIU01000019
Search identical group
Phylum/ClassNitrospirota
SpeciesThermodesulfovibrio thiophilus DSM 17215 [AUIU]
Start position on genome 1734
End posion on genome 1658
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttaaaaacaT
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGATAGCGCACCTGCCTTGGGAGCAGGGGGCCGGTGGTTCAA
ATCCACTCGCCCCGATaa
Downstream region at tRNA end position 
taaaatcaaa
Secondary structure (Cloverleaf model)
>W131231888	Pro	TGG
                   T      ATaa taaaatcaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C A C C     A
    C C G A        A      + | | | |     A
  T         C G C G       G G T G G     C
  G         | | | |                 T T
  G         G C G C
    A T A          A     GGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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