The detailed information of tRNA gene sequence


Sequence ID>W131244763
Genome IDCAQJ01000021
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospina gracilis 3/211 [CAQJ]
Start position on genome 42779
End posion on genome 42871
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgaatacaa
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTGAAGGCGCACGCCTGCTAAGTGTGTGTAGGGCTTAAACC
TTACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtcattacat
Secondary structure (Cloverleaf model)
>W131244763	Ser	GCT
                   a      GCCA gtcattacat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TGTAGGGCTTAAACCTTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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