The detailed information of tRNA gene sequence


Sequence ID>W1711394537
Genome IDMEQJ01000129
Search identical group
Phylum/ClassBdellovibrionota
SpeciesBdellovibrionales bacterium RIFOXYD1_FULL_53_11 [MEQJ]
Start position on genome 23232
End posion on genome 23307
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttaattact
tRNA gene sequence 
AGGCCAGTAGCTCCAATGGTAGAGCGGCGGATTCCAAATCCGTAGGTTGTGGGTTCGAAT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
cttgacgggt
Secondary structure (Cloverleaf model)
>W1711394537	Trp	CCA
                   t      GCCA cttgacgggt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A C        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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