The detailed information of tRNA gene sequence


Sequence ID>W1711395073
Genome IDMESS01000137
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix sp. RBG_13_44_9 [MESS]
Start position on genome 26100
End posion on genome 26194
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
tatttcttga
tRNA gene sequence
GGAGAGGTGGCCGAGTTGGCTGAAGGCGCTCGCCTGCTAAGTGAGTGTAGCGGGTTAAAC
TGCTACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position
aaaaaacatt
Secondary structure (Cloverleaf model)
>W1711395073	Ser	GCT
                   a      GCCA aaaaaacatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TGTAGCGGGTTAAACTGCTACC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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